WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03G9.6 Sequence Name  W03G9.6
Length (nt)  1155   Chromosome Location  I: 4984819-4984974
Chromosome . Primary Identifier  I Chromosome Location . Start  4984819
Chromosome Location . End  4984974
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G9.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE14564 PAF-1 42.9 384 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054731
WBRNAi00004406
WBRNAi00036255

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03G9.6 4984819 4984974 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003906 paf-1 W03G9.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03G9.6 4984819 4984974 -1
CDS:W03G9.6 4985228 4985677 -1
CDS:W03G9.6 4985721 4985844 -1
CDS:W03G9.6 4985922 4986077 -1
CDS:W03G9.6 4986120 4986247 -1
CDS:W03G9.6 4986476 4986616 -1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03G9.6.2 W03G9.6.2 1294   I: 4984705-4986641
Transcript:W03G9.6.1 W03G9.6.1 1335   I: 4984718-4986739