WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.1.1 Sequence Name  C34F6.1.1
Length (nt)  3486   Chromosome Location  X: 11192485-11196841
Chromosome . Primary Identifier  X Chromosome Location . Start  11192485
Chromosome Location . End  11196841 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007938 C34F6.1 C34F6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.1 C34F6.1 3132   X: 11192832-11193032

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.1.1 11192485 11196841 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252138   548   X: 11192485-11193032 Caenorhabditis elegans
Exon252139   305   X: 11193152-11193456 Caenorhabditis elegans
Exon252140   321   X: 11193509-11193829 Caenorhabditis elegans
Exon252141   312   X: 11193897-11194208 Caenorhabditis elegans
Exon252142   783   X: 11194258-11195040 Caenorhabditis elegans
Exon252143   168   X: 11195094-11195261 Caenorhabditis elegans
Exon252144   168   X: 11195342-11195509 Caenorhabditis elegans
Exon252145   333   X: 11195571-11195903 Caenorhabditis elegans
Exon252147   154   X: 11196155-11196308 Caenorhabditis elegans
Exon252148   203   X: 11196360-11196562 Caenorhabditis elegans
Exon252149   133   X: 11196606-11196738 Caenorhabditis elegans
Exon252150   58   X: 11196784-11196841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.1.1 11192485 11196841 -1

1 Sequence

Length
3486

1 Sequence Ontology Term

Identifier Name Description
transcript