WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.4.1 Sequence Name  C34F6.4.1
Length (nt)  1395   Chromosome Location  X: 11204103-11207155
Chromosome . Primary Identifier  X Chromosome Location . Start  11204103
Chromosome Location . End  11207155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002029 hst-2 C34F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.4 C34F6.4 975   X: 11204456-11204540

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.4.1 11204103 11207155 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252163   438   X: 11204103-11204540 Caenorhabditis elegans
Exon252164   142   X: 11205166-11205307 Caenorhabditis elegans
Exon252165   164   X: 11205791-11205954 Caenorhabditis elegans
Exon252166   98   X: 11206001-11206098 Caenorhabditis elegans
Exon252167   136   X: 11206410-11206545 Caenorhabditis elegans
Exon252168   107   X: 11206637-11206743 Caenorhabditis elegans
Exon252169   105   X: 11206792-11206896 Caenorhabditis elegans
Exon252170   205   X: 11206951-11207155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.4.1 11204103 11207155 -1

1 Sequence

Length
1395

1 Sequence Ontology Term

Identifier Name Description
transcript