WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.8.1 Sequence Name  C34F6.8.1
Length (nt)  1435   Chromosome Location  X: 11216000-11218150
Chromosome . Primary Identifier  X Chromosome Location . Start  11216000
Chromosome Location . End  11218150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007942 idh-2 C34F6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.8 C34F6.8 1308   X: 11216006-11216161

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.8.1 11216000 11218150 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252193   162   X: 11216000-11216161 Caenorhabditis elegans
Exon252194   78   X: 11216206-11216283 Caenorhabditis elegans
Exon252196   530   X: 11216562-11217091 Caenorhabditis elegans
Exon252197   152   X: 11217137-11217288 Caenorhabditis elegans
Exon252198   211   X: 11217339-11217549 Caenorhabditis elegans
Exon252199   302   X: 11217849-11218150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.8.1 11216000 11218150 1

1 Sequence

Length
1435

1 Sequence Ontology Term

Identifier Name Description
transcript