WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.10a.2 Sequence Name  C34F6.10a.2
Length (nt)  5010   Chromosome Location  X: 11229213-11237383
Chromosome . Primary Identifier  X Chromosome Location . Start  11229213
Chromosome Location . End  11237383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.10a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007944 C34F6.10 C34F6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.10a C34F6.10a 4398   X: 11229807-11229944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10a.2 11229213 11237383 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252217   732   X: 11229213-11229944 Caenorhabditis elegans
Exon252223   72   X: 11229991-11230062 Caenorhabditis elegans
Exon252229   168   X: 11230132-11230299 Caenorhabditis elegans
Exon252235   337   X: 11230355-11230691 Caenorhabditis elegans
Exon252241   78   X: 11230741-11230818 Caenorhabditis elegans
Exon252247   803   X: 11230864-11231666 Caenorhabditis elegans
Exon252253   138   X: 11231717-11231854 Caenorhabditis elegans
Exon252259   148   X: 11231906-11232053 Caenorhabditis elegans
Exon252265   968   X: 11232103-11233070 Caenorhabditis elegans
Exon252271   108   X: 11233189-11233296 Caenorhabditis elegans
Exon252277   792   X: 11233520-11234311 Caenorhabditis elegans
Exon252283   72   X: 11234367-11234438 Caenorhabditis elegans
Exon252286   113   X: 11234508-11234620 Caenorhabditis elegans
Exon252292   380   X: 11236333-11236712 Caenorhabditis elegans
Exon252299   101   X: 11237283-11237383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10a.2 11229213 11237383 -1

1 Sequence

Length
5010

1 Sequence Ontology Term

Identifier Name Description
transcript