WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.10a.1 Sequence Name  C34F6.10a.1
Length (nt)  5132   Chromosome Location  X: 11229213-11240633
Chromosome . Primary Identifier  X Chromosome Location . Start  11229213
Chromosome Location . End  11240633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007944 C34F6.10 C34F6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.10a C34F6.10a 4398   X: 11229807-11229944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34F6.10a.1 11229213 11240633 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252218   732   X: 11229213-11229944 Caenorhabditis elegans
Exon252222   72   X: 11229991-11230062 Caenorhabditis elegans
Exon252228   168   X: 11230132-11230299 Caenorhabditis elegans
Exon252234   337   X: 11230355-11230691 Caenorhabditis elegans
Exon252240   78   X: 11230741-11230818 Caenorhabditis elegans
Exon252246   803   X: 11230864-11231666 Caenorhabditis elegans
Exon252252   138   X: 11231717-11231854 Caenorhabditis elegans
Exon252258   148   X: 11231906-11232053 Caenorhabditis elegans
Exon252264   968   X: 11232103-11233070 Caenorhabditis elegans
Exon252270   108   X: 11233189-11233296 Caenorhabditis elegans
Exon252276   792   X: 11233520-11234311 Caenorhabditis elegans
Exon252282   72   X: 11234367-11234438 Caenorhabditis elegans
Exon252285   113   X: 11234508-11234620 Caenorhabditis elegans
Exon252291   380   X: 11236333-11236712 Caenorhabditis elegans
Exon252297   99   X: 11237283-11237381 Caenorhabditis elegans
Exon252303   124   X: 11240510-11240633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34F6.10a.1 11229213 11240633 -1

1 Sequence

Length
5132

1 Sequence Ontology Term

Identifier Name Description
transcript