WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.10c.1 Sequence Name  C34F6.10c.1
Length (nt)  4947   Chromosome Location  X: 11229220-11240626
Chromosome . Primary Identifier  X Chromosome Location . Start  11229220
Chromosome Location . End  11240626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007944 C34F6.10 C34F6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.10c C34F6.10c 4344   X: 11229807-11229944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10c.1 11229220 11240626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252220   725   X: 11229220-11229944 Caenorhabditis elegans
Exon252225   72   X: 11229991-11230062 Caenorhabditis elegans
Exon252231   168   X: 11230132-11230299 Caenorhabditis elegans
Exon252237   337   X: 11230355-11230691 Caenorhabditis elegans
Exon252243   78   X: 11230741-11230818 Caenorhabditis elegans
Exon252249   803   X: 11230864-11231666 Caenorhabditis elegans
Exon252255   138   X: 11231717-11231854 Caenorhabditis elegans
Exon252261   148   X: 11231906-11232053 Caenorhabditis elegans
Exon252267   968   X: 11232103-11233070 Caenorhabditis elegans
Exon252273   108   X: 11233189-11233296 Caenorhabditis elegans
Exon252279   792   X: 11233520-11234311 Caenorhabditis elegans
Exon252288   113   X: 11234508-11234620 Caenorhabditis elegans
Exon252294   380   X: 11236333-11236712 Caenorhabditis elegans
Exon252301   117   X: 11240510-11240626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10c.1 11229220 11240626 -1

1 Sequence

Length
4947

1 Sequence Ontology Term

Identifier Name Description
transcript