WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46H11.4c.1 Sequence Name  C46H11.4c.1
Length (nt)  1834   Chromosome Location  I: 5027155-5041157
Chromosome . Primary Identifier  I Chromosome Location . Start  5027155
Chromosome Location . End  5041157 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002979 lfe-2 C46H11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46H11.4c C46H11.4c 1386   I: 5027211-5027234

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.4c.1 5027155 5041157 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11402   80   I: 5027155-5027234 Caenorhabditis elegans
Exon11405   59   I: 5028861-5028919 Caenorhabditis elegans
Exon11408   66   I: 5029165-5029230 Caenorhabditis elegans
Exon11411   151   I: 5030867-5031017 Caenorhabditis elegans
Exon11417   120   I: 5036734-5036853 Caenorhabditis elegans
Exon11424   94   I: 5038545-5038638 Caenorhabditis elegans
Exon11430   150   I: 5038695-5038844 Caenorhabditis elegans
Exon11436   275   I: 5038929-5039203 Caenorhabditis elegans
Exon11442   351   I: 5039589-5039939 Caenorhabditis elegans
Exon11447   488   I: 5040670-5041157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.4c.1 5027155 5041157 1

1 Sequence

Length
1834

1 Sequence Ontology Term

Identifier Name Description
transcript