WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46H11.4e.1 Sequence Name  C46H11.4e.1
Length (nt)  1425   Chromosome Location  I: 5027707-5040765
Chromosome . Primary Identifier  I Chromosome Location . Start  5027707
Chromosome Location . End  5040765 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002979 lfe-2 C46H11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46H11.4e C46H11.4e 1425   I: 5027707-5027769

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.4e.1 5027707 5040765 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11403   63   I: 5027707-5027769 Caenorhabditis elegans
Exon11406   59   I: 5028861-5028919 Caenorhabditis elegans
Exon11409   66   I: 5029165-5029230 Caenorhabditis elegans
Exon11412   151   I: 5030867-5031017 Caenorhabditis elegans
Exon11418   120   I: 5036734-5036853 Caenorhabditis elegans
Exon11425   94   I: 5038545-5038638 Caenorhabditis elegans
Exon11431   150   I: 5038695-5038844 Caenorhabditis elegans
Exon11437   275   I: 5038929-5039203 Caenorhabditis elegans
Exon11443   351   I: 5039589-5039939 Caenorhabditis elegans
Exon11446   96   I: 5040670-5040765 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.4e.1 5027707 5040765 1

1 Sequence

Length
1425

1 Sequence Ontology Term

Identifier Name Description
transcript