WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C46H11.8 Sequence Name  C46H11.8
Length (nt)  885   Chromosome Location  I: 5044295-5044434
Chromosome . Primary Identifier  I Chromosome Location . Start  5044295
Chromosome Location . End  5044434
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34274 PHAT-1 30.3 294 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042631
WBRNAi00003171
WBRNAi00029882

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C46H11.8 5044295 5044434 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016732 phat-1 C46H11.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C46H11.8 5044295 5044434 -1
CDS:C46H11.8 5044516 5044695 -1
CDS:C46H11.8 5045066 5045479 -1
CDS:C46H11.8 5045524 5045598 -1
CDS:C46H11.8 5045645 5045720 -1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C46H11.8.1 C46H11.8.1 982   I: 5044198-5045720