WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C46H11.11c Sequence Name  C46H11.11c
Length (nt)  4092   Chromosome Location  I: 5058620-5058675
Chromosome . Primary Identifier  I Chromosome Location . Start  5058620
Chromosome Location . End  5058675
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.11c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50897 FHOD-1, isoform c 154.6 1363 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042624
WBRNAi00022306
WBRNAi00029884
WBRNAi00111040
WBRNAi00111039
WBRNAi00117058

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C46H11.11c 5058620 5058675 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016735 fhod-1 C46H11.11 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:C46H11.11c 5058620 5058675 -1
CDS:C46H11.11c 5058800 5058919 -1
CDS:C46H11.11c 5058965 5060186 -1
CDS:C46H11.11c 5060238 5060527 -1
CDS:C46H11.11c 5060774 5061110 -1
CDS:C46H11.11c 5061157 5061285 -1
CDS:C46H11.11c 5061357 5061494 -1
CDS:C46H11.11c 5061610 5061697 -1
CDS:C46H11.11c 5061852 5061998 -1
CDS:C46H11.11c 5062125 5062598 -1
CDS:C46H11.11c 5063151 5063323 -1
CDS:C46H11.11c 5063373 5063603 -1
CDS:C46H11.11c 5064074 5064124 -1
CDS:C46H11.11c 5064194 5064394 -1
CDS:C46H11.11c 5064608 5064675 -1
CDS:C46H11.11c 5065230 5065288 -1
CDS:C46H11.11c 5068201 5068375 -1
CDS:C46H11.11c 5068696 5068828 -1

1 Sequence

Length
4092

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C46H11.11c.1 C46H11.11c.1 4092   I: 5058620-5068828