WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08G12.2 Sequence Name  F08G12.2
Length (nt)  996   Chromosome Location  X: 11298252-11298307
Chromosome . Primary Identifier  X Chromosome Location . Start  11298252
Chromosome Location . End  11298307
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G12.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18578 SNRP-40.1 36.8 331 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001363
WBRNAi00044037
WBRNAi00080063
WBRNAi00030659
WBRNAi00080147

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08G12.2 11298252 11298307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008586 snrp-40.1 F08G12.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08G12.2 11298252 11298307 -1
CDS:F08G12.2 11298379 11299135 -1
CDS:F08G12.2 11299319 11299417 -1
CDS:F08G12.2 11299467 11299534 -1
CDS:F08G12.2 11299585 11299600 -1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08G12.2.1 F08G12.2.1 1396   X: 11298036-11299784