WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G12.1.1 Sequence Name  F08G12.1.1
Length (nt)  2187   Chromosome Location  X: 11302015-11305873
Chromosome . Primary Identifier  X Chromosome Location . Start  11302015
Chromosome Location . End  11305873 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008585 F08G12.1 F08G12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G12.1 F08G12.1 1908   X: 11302294-11302500

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08G12.1.1 11302015 11305873 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252450   486   X: 11302015-11302500 Caenorhabditis elegans
Exon252451   168   X: 11302545-11302712 Caenorhabditis elegans
Exon252452   132   X: 11303071-11303202 Caenorhabditis elegans
Exon252453   71   X: 11303251-11303321 Caenorhabditis elegans
Exon252454   164   X: 11303391-11303554 Caenorhabditis elegans
Exon252455   148   X: 11303601-11303748 Caenorhabditis elegans
Exon252456   44   X: 11303940-11303983 Caenorhabditis elegans
Exon252457   135   X: 11304029-11304163 Caenorhabditis elegans
Exon252458   104   X: 11304221-11304324 Caenorhabditis elegans
Exon252459   118   X: 11304369-11304486 Caenorhabditis elegans
Exon252460   230   X: 11304537-11304766 Caenorhabditis elegans
Exon252461   150   X: 11305348-11305497 Caenorhabditis elegans
Exon252462   107   X: 11305588-11305694 Caenorhabditis elegans
Exon252463   130   X: 11305744-11305873 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08G12.1.1 11302015 11305873 -1

1 Sequence

Length
2187

1 Sequence Ontology Term

Identifier Name Description
transcript