WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08G12.4 Sequence Name  F08G12.4
Length (nt)  525   Chromosome Location  X: 11307369-11307506
Chromosome . Primary Identifier  X Chromosome Location . Start  11307369
Chromosome Location . End  11307506
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G12.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03169 VHL-1 20.3 174 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00108009
WBRNAi00108010
WBRNAi00044039
WBRNAi00030661
WBRNAi00012919
WBRNAi00084306
WBRNAi00084307
WBRNAi00076278
WBRNAi00092432
WBRNAi00092431
WBRNAi00084290
WBRNAi00084289
WBRNAi00084291
WBRNAi00108007
WBRNAi00108008
WBRNAi00084303
WBRNAi00070679
WBRNAi00084304
WBRNAi00077384
WBRNAi00084246
WBRNAi00084247
WBRNAi00070680
WBRNAi00103097
WBRNAi00103103
WBRNAi00117817
WBRNAi00092081
WBRNAi00092080

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08G12.4 11307369 11307506 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006922 vhl-1 F08G12.4 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08G12.4 11307369 11307506 1
CDS:F08G12.4 11307556 11307751 1
CDS:F08G12.4 11307971 11308161 1

1 Sequence

Length
525

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08G12.4.1 F08G12.4.1 895   X: 11307356-11308518