WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G12.8.1 Sequence Name  F08G12.8.1
Length (nt)  623   Chromosome Location  X: 11317050-11318055
Chromosome . Primary Identifier  X Chromosome Location . Start  11317050
Chromosome Location . End  11318055 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008589 nlp-57 F08G12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G12.8 F08G12.8 201   X: 11317362-11317377

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08G12.8.1 11317050 11318055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252477   328   X: 11317050-11317377 Caenorhabditis elegans
Exon252478   77   X: 11317429-11317505 Caenorhabditis elegans
Exon252479   218   X: 11317838-11318055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08G12.8.1 11317050 11318055 1

1 Sequence

Length
623

1 Sequence Ontology Term

Identifier Name Description
transcript