WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK455.4.1 Sequence Name  ZK455.4.1
Length (nt)  1933   Chromosome Location  X: 11321079-11324251
Chromosome . Primary Identifier  X Chromosome Location . Start  11321079
Chromosome Location . End  11324251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK455.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK455.4 ZK455.4 1857   X: 11321155-11321281

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK455.4.1 11321079 11324251 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252493   203   X: 11321079-11321281 Caenorhabditis elegans
Exon252494   188   X: 11321330-11321517 Caenorhabditis elegans
Exon252495   279   X: 11321570-11321848 Caenorhabditis elegans
Exon252496   88   X: 11321931-11322018 Caenorhabditis elegans
Exon252497   81   X: 11322060-11322140 Caenorhabditis elegans
Exon252498   117   X: 11322331-11322447 Caenorhabditis elegans
Exon252499   170   X: 11322508-11322677 Caenorhabditis elegans
Exon252500   107   X: 11322735-11322841 Caenorhabditis elegans
Exon252501   401   X: 11322892-11323292 Caenorhabditis elegans
Exon252502   140   X: 11323905-11324044 Caenorhabditis elegans
Exon252503   159   X: 11324093-11324251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK455.4.1 11321079 11324251 -1

1 Sequence

Length
1933

1 Sequence Ontology Term

Identifier Name Description
transcript