WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK455.8a.1 Sequence Name  ZK455.8a.1
Length (nt)  2385   Chromosome Location  X: 11346455-11350244
Chromosome . Primary Identifier  X Chromosome Location . Start  11346455
Chromosome Location . End  11350244 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK455.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003843 oct-2 ZK455.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK455.8a ZK455.8a 2274   X: 11346456-11346611

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK455.8a.1 11346455 11350244 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252557   157   X: 11346455-11346611 Caenorhabditis elegans
Exon252558   200   X: 11346702-11346901 Caenorhabditis elegans
Exon252559   116   X: 11346947-11347062 Caenorhabditis elegans
Exon252560   137   X: 11347108-11347244 Caenorhabditis elegans
Exon252561   252   X: 11347424-11347675 Caenorhabditis elegans
Exon252563   131   X: 11347723-11347853 Caenorhabditis elegans
Exon252564   280   X: 11348005-11348284 Caenorhabditis elegans
Exon252566   276   X: 11348334-11348609 Caenorhabditis elegans
Exon252568   65   X: 11348656-11348720 Caenorhabditis elegans
Exon252570   105   X: 11348774-11348878 Caenorhabditis elegans
Exon252572   79   X: 11349482-11349560 Caenorhabditis elegans
Exon252574   291   X: 11349608-11349898 Caenorhabditis elegans
Exon252576   296   X: 11349949-11350244 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK455.8a.1 11346455 11350244 1

1 Sequence

Length
2385

1 Sequence Ontology Term

Identifier Name Description
transcript