WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.10.1 Sequence Name  Y110A7A.10.1
Length (nt)  1806   Chromosome Location  I: 5107843-5110183
Chromosome . Primary Identifier  I Chromosome Location . Start  5107843
Chromosome Location . End  5110183 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000001 aap-1 Y110A7A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.10 Y110A7A.10 1569   I: 5107844-5108016

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.10.1 5107843 5110183 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11719   174   I: 5107843-5108016 Caenorhabditis elegans
Exon11720   260   I: 5108064-5108323 Caenorhabditis elegans
Exon11721   266   I: 5108505-5108770 Caenorhabditis elegans
Exon11722   432   I: 5108998-5109429 Caenorhabditis elegans
Exon11723   674   I: 5109510-5110183 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.10.1 5107843 5110183 1

1 Sequence

Length
1806

1 Sequence Ontology Term

Identifier Name Description
transcript