WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42E11.2b.1 Sequence Name  F42E11.2b.1
Length (nt)  333   Chromosome Location  X: 11368758-11370669
Chromosome . Primary Identifier  X Chromosome Location . Start  11368758
Chromosome Location . End  11370669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42E11.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009632 ttyh-1 F42E11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42E11.2b F42E11.2b 333   X: 11368758-11368871

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42E11.2b.1 11368758 11370669 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252634   114   X: 11368758-11368871 Caenorhabditis elegans
Exon252637   170   X: 11370374-11370543 Caenorhabditis elegans
Exon252639   49   X: 11370621-11370669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42E11.2b.1 11368758 11370669 1

1 Sequence

Length
333

1 Sequence Ontology Term

Identifier Name Description
transcript