WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.6b.1 Sequence Name  Y110A7A.6b.1
Length (nt)  1434   Chromosome Location  I: 5131522-5134032
Chromosome . Primary Identifier  I Chromosome Location . Start  5131522
Chromosome Location . End  5134032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022456 pfkb-1.1 Y110A7A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.6b Y110A7A.6b 1308   I: 5131522-5131597

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.6b.1 5131522 5134032 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11824   76   I: 5131522-5131597 Caenorhabditis elegans
Exon11828   126   I: 5131904-5132029 Caenorhabditis elegans
Exon11831   103   I: 5132084-5132186 Caenorhabditis elegans
Exon11834   67   I: 5132243-5132309 Caenorhabditis elegans
Exon11837   144   I: 5132367-5132510 Caenorhabditis elegans
Exon11840   261   I: 5132559-5132819 Caenorhabditis elegans
Exon11841   529   I: 5133327-5133855 Caenorhabditis elegans
Exon11844   128   I: 5133905-5134032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.6b.1 5131522 5134032 1

1 Sequence

Length
1434

1 Sequence Ontology Term

Identifier Name Description
transcript