WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A7A.6a Sequence Name  Y110A7A.6a
Length (nt)  1353   Chromosome Location  I: 5131540-5131597
Chromosome . Primary Identifier  I Chromosome Location . Start  5131540
Chromosome Location . End  5131597
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38000 PFKB-1.1, isoform a 52.4 450 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00055327
WBRNAi00004528
WBRNAi00036558
WBRNAi00117127

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.6a 5131540 5131597 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022456 pfkb-1.1 Y110A7A.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.6a 5131540 5131597 1
CDS:Y110A7A.6a 5131904 5132029 1
CDS:Y110A7A.6a 5132084 5132186 1
CDS:Y110A7A.6a 5132243 5132309 1
CDS:Y110A7A.6a 5132367 5132510 1
CDS:Y110A7A.6a 5132559 5132819 1
CDS:Y110A7A.6a 5133327 5133920 1

1 Sequence

Length
1353

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A7A.6a.1 Y110A7A.6a.1 1558   I: 5131520-5134105
Transcript:Y110A7A.6a.2 Y110A7A.6a.2 1534   I: 5131531-5134092