WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B12.2.1 Sequence Name  F08B12.2.1
Length (nt)  1093   Chromosome Location  X: 11393294-11394619
Chromosome . Primary Identifier  X Chromosome Location . Start  11393294
Chromosome Location . End  11394619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004197 prx-12 F08B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B12.2 F08B12.2 1035   X: 11393301-11393441

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B12.2.1 11393294 11394619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252693   148   X: 11393294-11393441 Caenorhabditis elegans
Exon252694   109   X: 11393491-11393599 Caenorhabditis elegans
Exon252695   194   X: 11393647-11393840 Caenorhabditis elegans
Exon252696   215   X: 11393885-11394099 Caenorhabditis elegans
Exon252697   318   X: 11394145-11394462 Caenorhabditis elegans
Exon252698   109   X: 11394511-11394619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B12.2.1 11393294 11394619 1

1 Sequence

Length
1093

1 Sequence Ontology Term

Identifier Name Description
transcript