WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C32E12.2.1 Sequence Name  C32E12.2.1
Length (nt)  2353   Chromosome Location  I: 5196073-5200263
Chromosome . Primary Identifier  I Chromosome Location . Start  5196073
Chromosome Location . End  5200263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32E12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016328 pde-5 C32E12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32E12.2 C32E12.2 2187   I: 5196078-5196248

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C32E12.2.1 5196073 5200263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12012   176   I: 5196073-5196248 Caenorhabditis elegans
Exon12013   54   I: 5196296-5196349 Caenorhabditis elegans
Exon12014   135   I: 5196708-5196842 Caenorhabditis elegans
Exon12015   64   I: 5196890-5196953 Caenorhabditis elegans
Exon12016   95   I: 5197224-5197318 Caenorhabditis elegans
Exon12017   150   I: 5197586-5197735 Caenorhabditis elegans
Exon12019   149   I: 5197780-5197928 Caenorhabditis elegans
Exon12021   162   I: 5198077-5198238 Caenorhabditis elegans
Exon12022   255   I: 5198296-5198550 Caenorhabditis elegans
Exon12023   87   I: 5198613-5198699 Caenorhabditis elegans
Exon12024   154   I: 5198745-5198898 Caenorhabditis elegans
Exon12025   329   I: 5199109-5199437 Caenorhabditis elegans
Exon12026   193   I: 5199483-5199675 Caenorhabditis elegans
Exon12027   89   I: 5199867-5199955 Caenorhabditis elegans
Exon12028   261   I: 5200003-5200263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C32E12.2.1 5196073 5200263 1

1 Sequence

Length
2353

1 Sequence Ontology Term

Identifier Name Description
transcript