WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3c.2 Sequence Name  F46C3.3c.2
Length (nt)  8619   Chromosome Location  X: 11420465-11433585
Chromosome . Primary Identifier  X Chromosome Location . Start  11420465
Chromosome Location . End  11433585 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3c F46C3.3c 2892   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3c.2 11420465 11433585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

40 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252902   359   X: 11420465-11420823 Caenorhabditis elegans
Exon252914   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252925   167   X: 11421273-11421439 Caenorhabditis elegans
Exon252936   143   X: 11421490-11421632 Caenorhabditis elegans
Exon252947   140   X: 11422050-11422189 Caenorhabditis elegans
Exon252958   161   X: 11422239-11422399 Caenorhabditis elegans
Exon252969   175   X: 11422446-11422620 Caenorhabditis elegans
Exon252980   95   X: 11422702-11422796 Caenorhabditis elegans
Exon252991   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253002   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253013   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253024   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253035   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253046   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253057   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253068   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253079   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253094   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253104   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253122   789   X: 11426237-11427025 Caenorhabditis elegans
Exon253134   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253145   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253157   476   X: 11427743-11428218 Caenorhabditis elegans
Exon253167   227   X: 11428401-11428627 Caenorhabditis elegans
Exon253172   154   X: 11428738-11428891 Caenorhabditis elegans
Exon253176   125   X: 11428940-11429064 Caenorhabditis elegans
Exon253180   195   X: 11429112-11429306 Caenorhabditis elegans
Exon253184   135   X: 11429361-11429495 Caenorhabditis elegans
Exon253188   161   X: 11429540-11429700 Caenorhabditis elegans
Exon253192   243   X: 11429894-11430136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3c.2 11420465 11433585 -1

1 Sequence

Length
8619

1 Sequence Ontology Term

Identifier Name Description
transcript