WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3b.1 Sequence Name  F46C3.3b.1
Length (nt)  3268   Chromosome Location  X: 11420481-11426032
Chromosome . Primary Identifier  X Chromosome Location . Start  11420481
Chromosome Location . End  11426032 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3b F46C3.3b 3003   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3b.1 11420481 11426032 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252905   343   X: 11420481-11420823 Caenorhabditis elegans
Exon252912   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252923   167   X: 11421273-11421439 Caenorhabditis elegans
Exon252934   143   X: 11421490-11421632 Caenorhabditis elegans
Exon252945   140   X: 11422050-11422189 Caenorhabditis elegans
Exon252956   161   X: 11422239-11422399 Caenorhabditis elegans
Exon252967   175   X: 11422446-11422620 Caenorhabditis elegans
Exon252978   95   X: 11422702-11422796 Caenorhabditis elegans
Exon252989   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253000   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253011   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253022   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253033   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253044   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253055   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253066   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253077   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253088   111   X: 11425494-11425604 Caenorhabditis elegans
Exon253092   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253112   129   X: 11425904-11426032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3b.1 11420481 11426032 -1

1 Sequence

Length
3268

1 Sequence Ontology Term

Identifier Name Description
transcript