WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3d.1 Sequence Name  F46C3.3d.1
Length (nt)  4128   Chromosome Location  X: 11420743-11428599
Chromosome . Primary Identifier  X Chromosome Location . Start  11420743
Chromosome Location . End  11428599 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3d F46C3.3d 4128   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3d.1 11420743 11428599 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252908   81   X: 11420743-11420823 Caenorhabditis elegans
Exon252917   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252928   167   X: 11421273-11421439 Caenorhabditis elegans
Exon252939   143   X: 11421490-11421632 Caenorhabditis elegans
Exon252950   140   X: 11422050-11422189 Caenorhabditis elegans
Exon252961   161   X: 11422239-11422399 Caenorhabditis elegans
Exon252972   175   X: 11422446-11422620 Caenorhabditis elegans
Exon252983   95   X: 11422702-11422796 Caenorhabditis elegans
Exon252994   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253005   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253016   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253027   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253038   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253049   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253060   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253071   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253082   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253089   111   X: 11425494-11425604 Caenorhabditis elegans
Exon253097   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253107   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253117   83   X: 11426237-11426319 Caenorhabditis elegans
Exon253127   49   X: 11426977-11427025 Caenorhabditis elegans
Exon253137   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253148   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253159   476   X: 11427743-11428218 Caenorhabditis elegans
Exon253163   199   X: 11428401-11428599 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3d.1 11420743 11428599 -1

1 Sequence

Length
4128

1 Sequence Ontology Term

Identifier Name Description
transcript