WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55A12.7 Sequence Name  F55A12.7
Length (nt)  1281   Chromosome Location  I: 5342481-5342579
Chromosome . Primary Identifier  I Chromosome Location . Start  5342481
Chromosome Location . End  5342579
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30145 APM-1 48.6 426 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00095643
WBRNAi00048422
WBRNAi00003777
WBRNAi00025654
WBRNAi00115737
WBRNAi00094139
WBRNAi00103855
WBRNAi00106012
WBRNAi00063262
WBRNAi00115738
WBRNAi00115734
WBRNAi00115735
WBRNAi00032840
WBRNAi00060757
WBRNAi00060758
WBRNAi00025653
WBRNAi00002077
WBRNAi00060993
WBRNAi00060994
WBRNAi00106495
WBRNAi00115736
WBRNAi00117170
WBRNAi00060756
WBRNAi00060755
WBRNAi00115741
WBRNAi00108866
WBRNAi00108921
WBRNAi00108976
WBRNAi00109031
WBRNAi00090548

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55A12.7 5342481 5342579 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000150 apm-1 F55A12.7 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55A12.7 5342481 5342579 -1
CDS:F55A12.7 5342625 5342749 -1
CDS:F55A12.7 5342978 5343137 -1
CDS:F55A12.7 5343188 5343408 -1
CDS:F55A12.7 5343453 5343588 -1
CDS:F55A12.7 5343666 5343807 -1
CDS:F55A12.7 5343909 5344107 -1
CDS:F55A12.7 5344167 5344323 -1
CDS:F55A12.7 5344663 5344704 -1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55A12.7.1 F55A12.7.1 1602   I: 5342180-5344724