WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29G6.2.1 Sequence Name  F29G6.2.1
Length (nt)  1237   Chromosome Location  X: 11509442-11511451
Chromosome . Primary Identifier  X Chromosome Location . Start  11509442
Chromosome Location . End  11511451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009258 ccdc-149 F29G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29G6.2 F29G6.2 1110   X: 11509462-11509612

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29G6.2.1 11509442 11511451 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253359   171   X: 11509442-11509612 Caenorhabditis elegans
Exon253360   127   X: 11509660-11509786 Caenorhabditis elegans
Exon253361   76   X: 11509848-11509923 Caenorhabditis elegans
Exon253362   138   X: 11509971-11510108 Caenorhabditis elegans
Exon253363   138   X: 11510185-11510322 Caenorhabditis elegans
Exon253364   93   X: 11510365-11510457 Caenorhabditis elegans
Exon253365   177   X: 11510818-11510994 Caenorhabditis elegans
Exon253366   165   X: 11511052-11511216 Caenorhabditis elegans
Exon253367   152   X: 11511300-11511451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29G6.2.1 11509442 11511451 -1

1 Sequence

Length
1237

1 Sequence Ontology Term

Identifier Name Description
transcript