WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29G6.3c.1 Sequence Name  F29G6.3c.1
Length (nt)  4545   Chromosome Location  X: 11511555-11519017
Chromosome . Primary Identifier  X Chromosome Location . Start  11511555
Chromosome Location . End  11519017 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009259 hpo-34 F29G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29G6.3c F29G6.3c 4362   X: 11511738-11511845

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F29G6.3c.1 11511555 11519017 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253369   291   X: 11511555-11511845 Caenorhabditis elegans
Exon253377   48   X: 11511892-11511939 Caenorhabditis elegans
Exon253384   108   X: 11511986-11512093 Caenorhabditis elegans
Exon253391   272   X: 11512138-11512409 Caenorhabditis elegans
Exon253397   58   X: 11512523-11512580 Caenorhabditis elegans
Exon253404   138   X: 11512662-11512799 Caenorhabditis elegans
Exon253412   381   X: 11514691-11515071 Caenorhabditis elegans
Exon253417   2385   X: 11515120-11517504 Caenorhabditis elegans
Exon253423   108   X: 11517551-11517658 Caenorhabditis elegans
Exon253430   102   X: 11517705-11517806 Caenorhabditis elegans
Exon253437   105   X: 11517854-11517958 Caenorhabditis elegans
Exon253444   118   X: 11518005-11518122 Caenorhabditis elegans
Exon253451   101   X: 11518180-11518280 Caenorhabditis elegans
Exon253460   66   X: 11518324-11518389 Caenorhabditis elegans
Exon253466   81   X: 11518441-11518521 Caenorhabditis elegans
Exon253472   54   X: 11518734-11518787 Caenorhabditis elegans
Exon253478   101   X: 11518845-11518945 Caenorhabditis elegans
Exon253482   28   X: 11518990-11519017 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F29G6.3c.1 11511555 11519017 -1

1 Sequence

Length
4545

1 Sequence Ontology Term

Identifier Name Description
transcript