WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55A12.4a Sequence Name  F55A12.4a
Length (nt)  1107   Chromosome Location  I: 5354181-5354238
Chromosome . Primary Identifier  I Chromosome Location . Start  5354181
Chromosome Location . End  5354238
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26924 DHS-2, isoform a 40.8 368 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00002223
WBRNAi00048419
WBRNAi00003774
WBRNAi00032838
WBRNAi00114793

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F55A12.4a 5354181 5354238 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F55A12.4a 5354181 5354238 1
CDS:F55A12.4a 5354351 5354530 1
CDS:F55A12.4a 5354581 5354654 1
CDS:F55A12.4a 5355019 5355160 1
CDS:F55A12.4a 5355478 5355631 1
CDS:F55A12.4a 5355684 5355879 1
CDS:F55A12.4a 5356104 5356179 1
CDS:F55A12.4a 5356650 5356785 1
CDS:F55A12.4a 5356842 5356932 1

1 Sequence

Length
1107

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55A12.4a.1 F55A12.4a.1 1204   I: 5354181-5357029