WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A12.2b.1 Sequence Name  F55A12.2b.1
Length (nt)  1012   Chromosome Location  I: 5365265-5366875
Chromosome . Primary Identifier  I Chromosome Location . Start  5365265
Chromosome Location . End  5366875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018863 F55A12.2 F55A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A12.2b F55A12.2b 753   I: 5365883-5366015

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.2b.1 5365265 5366875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12525   116   I: 5365265-5365380 Caenorhabditis elegans
Exon12528   188   I: 5365828-5366015 Caenorhabditis elegans
Exon12532   134   I: 5366069-5366202 Caenorhabditis elegans
Exon12536   226   I: 5366250-5366475 Caenorhabditis elegans
Exon12543   348   I: 5366528-5366875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.2b.1 5365265 5366875 1

1 Sequence

Length
1012

1 Sequence Ontology Term

Identifier Name Description
transcript