WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A12.2b.3 Sequence Name  F55A12.2b.3
Length (nt)  1189   Chromosome Location  I: 5365403-5366878
Chromosome . Primary Identifier  I Chromosome Location . Start  5365403
Chromosome Location . End  5366878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018863 F55A12.2 F55A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A12.2b F55A12.2b 753   I: 5365883-5366015

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.2b.3 5365403 5366878 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12526   290   I: 5365403-5365692 Caenorhabditis elegans
Exon12529   188   I: 5365828-5366015 Caenorhabditis elegans
Exon12534   134   I: 5366069-5366202 Caenorhabditis elegans
Exon12538   226   I: 5366250-5366475 Caenorhabditis elegans
Exon12544   351   I: 5366528-5366878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.2b.3 5365403 5366878 1

1 Sequence

Length
1189

1 Sequence Ontology Term

Identifier Name Description
transcript