WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35C5.3a.1 Sequence Name  C35C5.3a.1
Length (nt)  1098   Chromosome Location  X: 11545047-11546495
Chromosome . Primary Identifier  X Chromosome Location . Start  11545047
Chromosome Location . End  11546495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35C5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007955 selt-1.1 C35C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35C5.3a C35C5.3a 735   X: 11545410-11545754

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35C5.3a.1 11545047 11546495 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253576   708   X: 11545047-11545754 Caenorhabditis elegans
Exon253578   124   X: 11545805-11545928 Caenorhabditis elegans
Exon253580   108   X: 11545981-11546088 Caenorhabditis elegans
Exon253582   91   X: 11546286-11546376 Caenorhabditis elegans
Exon253584   67   X: 11546429-11546495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35C5.3a.1 11545047 11546495 -1

1 Sequence

Length
1098

1 Sequence Ontology Term

Identifier Name Description
transcript