WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35C5.5.1 Sequence Name  C35C5.5.1
Length (nt)  1731   Chromosome Location  X: 11560915-11563707
Chromosome . Primary Identifier  X Chromosome Location . Start  11560915
Chromosome Location . End  11563707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35C5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002975 lev-8 C35C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35C5.5 C35C5.5 1596   X: 11560929-11560983

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35C5.5.1 11560915 11563707 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253610   69   X: 11560915-11560983 Caenorhabditis elegans
Exon253611   194   X: 11561029-11561222 Caenorhabditis elegans
Exon253612   110   X: 11561392-11561501 Caenorhabditis elegans
Exon253613   103   X: 11561583-11561685 Caenorhabditis elegans
Exon253614   194   X: 11561735-11561928 Caenorhabditis elegans
Exon253615   93   X: 11562046-11562138 Caenorhabditis elegans
Exon253616   71   X: 11562500-11562570 Caenorhabditis elegans
Exon253617   144   X: 11562615-11562758 Caenorhabditis elegans
Exon253618   79   X: 11562801-11562879 Caenorhabditis elegans
Exon253619   241   X: 11562935-11563175 Caenorhabditis elegans
Exon253620   117   X: 11563222-11563338 Caenorhabditis elegans
Exon253621   316   X: 11563392-11563707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35C5.5.1 11560915 11563707 1

1 Sequence

Length
1731

1 Sequence Ontology Term

Identifier Name Description
transcript