WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05G16.1c.1 Sequence Name  H05G16.1c.1
Length (nt)  2573   Chromosome Location  X: 11581293-11585122
Chromosome . Primary Identifier  X Chromosome Location . Start  11581293
Chromosome Location . End  11585122 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05G16.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05G16.1c H05G16.1c 1953   X: 11581751-11581911

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05G16.1c.1 11581293 11585122 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253675   619   X: 11581293-11581911 Caenorhabditis elegans
Exon253678   301   X: 11581959-11582259 Caenorhabditis elegans
Exon253680   96   X: 11582769-11582864 Caenorhabditis elegans
Exon253682   128   X: 11582912-11583039 Caenorhabditis elegans
Exon253684   159   X: 11583084-11583242 Caenorhabditis elegans
Exon253686   448   X: 11583291-11583738 Caenorhabditis elegans
Exon253688   205   X: 11583784-11583988 Caenorhabditis elegans
Exon253690   221   X: 11584042-11584262 Caenorhabditis elegans
Exon253692   155   X: 11584648-11584802 Caenorhabditis elegans
Exon253693   241   X: 11584882-11585122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05G16.1c.1 11581293 11585122 1

1 Sequence

Length
2573

1 Sequence Ontology Term

Identifier Name Description
transcript