WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H9A.1.1 Sequence Name  Y71H9A.1.1
Length (nt)  2202   Chromosome Location  X: 11622967-11627113
Chromosome . Primary Identifier  X Chromosome Location . Start  11622967
Chromosome Location . End  11627113 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H9A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006694 twk-44 Y71H9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H9A.1 Y71H9A.1 2202   X: 11622967-11623074

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y71H9A.1.1 11622967 11627113 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253747   108   X: 11622967-11623074 Caenorhabditis elegans
Exon253748   63   X: 11623117-11623179 Caenorhabditis elegans
Exon253749   57   X: 11623368-11623424 Caenorhabditis elegans
Exon253751   302   X: 11623816-11624117 Caenorhabditis elegans
Exon253752   187   X: 11624165-11624351 Caenorhabditis elegans
Exon253753   116   X: 11624512-11624627 Caenorhabditis elegans
Exon253754   73   X: 11624697-11624769 Caenorhabditis elegans
Exon253755   122   X: 11624822-11624943 Caenorhabditis elegans
Exon253756   117   X: 11624986-11625102 Caenorhabditis elegans
Exon253757   95   X: 11625149-11625243 Caenorhabditis elegans
Exon253758   172   X: 11625293-11625464 Caenorhabditis elegans
Exon253760   94   X: 11625517-11625610 Caenorhabditis elegans
Exon253761   75   X: 11625659-11625733 Caenorhabditis elegans
Exon253762   156   X: 11625778-11625933 Caenorhabditis elegans
Exon253763   159   X: 11626050-11626208 Caenorhabditis elegans
Exon253764   129   X: 11626251-11626379 Caenorhabditis elegans
Exon253765   111   X: 11626428-11626538 Caenorhabditis elegans
Exon253766   66   X: 11627048-11627113 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y71H9A.1.1 11622967 11627113 -1

1 Sequence

Length
2202

1 Sequence Ontology Term

Identifier Name Description
transcript