WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H9A.3.1 Sequence Name  Y71H9A.3.1
Length (nt)  1416   Chromosome Location  X: 11644126-11647425
Chromosome . Primary Identifier  X Chromosome Location . Start  11644126
Chromosome Location . End  11647425 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H9A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006066 sto-4 Y71H9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H9A.3 Y71H9A.3 846   X: 11644443-11644491

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H9A.3.1 11644126 11647425 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253785   114   X: 11644126-11644239 Caenorhabditis elegans
Exon253787   113   X: 11644379-11644491 Caenorhabditis elegans
Exon253789   104   X: 11645115-11645218 Caenorhabditis elegans
Exon253791   156   X: 11645266-11645421 Caenorhabditis elegans
Exon253793   75   X: 11645469-11645543 Caenorhabditis elegans
Exon253797   168   X: 11645814-11645981 Caenorhabditis elegans
Exon253799   96   X: 11646031-11646126 Caenorhabditis elegans
Exon253801   60   X: 11646174-11646233 Caenorhabditis elegans
Exon253803   59   X: 11646309-11646367 Caenorhabditis elegans
Exon253806   471   X: 11646955-11647425 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H9A.3.1 11644126 11647425 1

1 Sequence

Length
1416

1 Sequence Ontology Term

Identifier Name Description
transcript