WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H9A.3.2 Sequence Name  Y71H9A.3.2
Length (nt)  1283   Chromosome Location  X: 11644172-11647300
Chromosome . Primary Identifier  X Chromosome Location . Start  11644172
Chromosome Location . End  11647300 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H9A.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006066 sto-4 Y71H9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H9A.3 Y71H9A.3 846   X: 11644443-11644491

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H9A.3.2 11644172 11647300 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253786   106   X: 11644172-11644277 Caenorhabditis elegans
Exon253788   113   X: 11644379-11644491 Caenorhabditis elegans
Exon253790   104   X: 11645115-11645218 Caenorhabditis elegans
Exon253792   156   X: 11645266-11645421 Caenorhabditis elegans
Exon253794   75   X: 11645469-11645543 Caenorhabditis elegans
Exon253798   168   X: 11645814-11645981 Caenorhabditis elegans
Exon253800   96   X: 11646031-11646126 Caenorhabditis elegans
Exon253802   60   X: 11646174-11646233 Caenorhabditis elegans
Exon253804   59   X: 11646309-11646367 Caenorhabditis elegans
Exon253805   346   X: 11646955-11647300 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H9A.3.2 11644172 11647300 1

1 Sequence

Length
1283

1 Sequence Ontology Term

Identifier Name Description
transcript