WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1053.1.1 Sequence Name  D1053.1.1
Length (nt)  1015   Chromosome Location  X: 11726264-11727936
Chromosome . Primary Identifier  X Chromosome Location . Start  11726264
Chromosome Location . End  11727936 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1053.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001790 gst-42 D1053.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1053.1 D1053.1 645   X: 11726494-11726614

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1053.1.1 11726264 11727936 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253997   351   X: 11726264-11726614 Caenorhabditis elegans
Exon253998   137   X: 11727039-11727175 Caenorhabditis elegans
Exon253999   81   X: 11727225-11727305 Caenorhabditis elegans
Exon254000   174   X: 11727397-11727570 Caenorhabditis elegans
Exon254001   65   X: 11727615-11727679 Caenorhabditis elegans
Exon254002   207   X: 11727730-11727936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1053.1.1 11726264 11727936 -1

1 Sequence

Length
1015

1 Sequence Ontology Term

Identifier Name Description
transcript