WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.1.1 Sequence Name  F59A3.1.1
Length (nt)  3291   Chromosome Location  I: 5520389-5529763
Chromosome . Primary Identifier  I Chromosome Location . Start  5520389
Chromosome Location . End  5529763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019074 cpd-1 F59A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.1 F59A3.1 3045   I: 5520391-5520501

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.1.1 5520389 5529763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13156   113   I: 5520389-5520501 Caenorhabditis elegans
Exon13157   80   I: 5521077-5521156 Caenorhabditis elegans
Exon13158   76   I: 5521206-5521281 Caenorhabditis elegans
Exon13159   159   I: 5521331-5521489 Caenorhabditis elegans
Exon13160   78   I: 5521536-5521613 Caenorhabditis elegans
Exon13161   90   I: 5521659-5521748 Caenorhabditis elegans
Exon13162   95   I: 5521799-5521893 Caenorhabditis elegans
Exon13163   133   I: 5521936-5522068 Caenorhabditis elegans
Exon13173   80   I: 5525843-5525922 Caenorhabditis elegans
Exon13174   171   I: 5525972-5526142 Caenorhabditis elegans
Exon13175   304   I: 5526323-5526626 Caenorhabditis elegans
Exon13176   65   I: 5526725-5526789 Caenorhabditis elegans
Exon13177   112   I: 5526837-5526948 Caenorhabditis elegans
Exon13178   297   I: 5527103-5527399 Caenorhabditis elegans
Exon13179   107   I: 5527450-5527556 Caenorhabditis elegans
Exon13180   121   I: 5527605-5527725 Caenorhabditis elegans
Exon13181   123   I: 5527778-5527900 Caenorhabditis elegans
Exon13182   301   I: 5528134-5528434 Caenorhabditis elegans
Exon13183   293   I: 5528563-5528855 Caenorhabditis elegans
Exon13184   157   I: 5529225-5529381 Caenorhabditis elegans
Exon13185   336   I: 5529428-5529763 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.1.1 5520389 5529763 1

1 Sequence

Length
3291

1 Sequence Ontology Term

Identifier Name Description
transcript