WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C40H5.4.1 Sequence Name  C40H5.4.1
Length (nt)  2871   Chromosome Location  X: 11759109-11764535
Chromosome . Primary Identifier  X Chromosome Location . Start  11759109
Chromosome Location . End  11764535 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40H5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008047 lact-7 C40H5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40H5.4 C40H5.4 2427   X: 11759262-11759330

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C40H5.4.1 11759109 11764535 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254048   222   X: 11759109-11759330 Caenorhabditis elegans
Exon254049   71   X: 11759736-11759806 Caenorhabditis elegans
Exon254050   152   X: 11759872-11760023 Caenorhabditis elegans
Exon254051   249   X: 11760069-11760317 Caenorhabditis elegans
Exon254052   170   X: 11760364-11760533 Caenorhabditis elegans
Exon254053   341   X: 11760598-11760938 Caenorhabditis elegans
Exon254054   67   X: 11760986-11761052 Caenorhabditis elegans
Exon254055   74   X: 11761291-11761364 Caenorhabditis elegans
Exon254056   158   X: 11761412-11761569 Caenorhabditis elegans
Exon254057   58   X: 11762015-11762072 Caenorhabditis elegans
Exon254058   188   X: 11762148-11762335 Caenorhabditis elegans
Exon254059   150   X: 11762672-11762821 Caenorhabditis elegans
Exon254060   121   X: 11763024-11763144 Caenorhabditis elegans
Exon254061   224   X: 11763268-11763491 Caenorhabditis elegans
Exon254062   125   X: 11763552-11763676 Caenorhabditis elegans
Exon254063   501   X: 11764035-11764535 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C40H5.4.1 11759109 11764535 1

1 Sequence

Length
2871

1 Sequence Ontology Term

Identifier Name Description
transcript