WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.2e.1 Sequence Name  C34E11.2e.1
Length (nt)  2418   Chromosome Location  X: 11805978-11814653
Chromosome . Primary Identifier  X Chromosome Location . Start  11805978
Chromosome Location . End  11814653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007935 C34E11.2 C34E11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.2e C34E11.2e 2418   X: 11805978-11806070

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.2e.1 11805978 11814653 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254125   93   X: 11805978-11806070 Caenorhabditis elegans
Exon254133   330   X: 11806173-11806502 Caenorhabditis elegans
Exon254141   114   X: 11807330-11807443 Caenorhabditis elegans
Exon254144   43   X: 11807745-11807787 Caenorhabditis elegans
Exon254150   43   X: 11807874-11807916 Caenorhabditis elegans
Exon254155   282   X: 11808951-11809232 Caenorhabditis elegans
Exon254160   112   X: 11809392-11809503 Caenorhabditis elegans
Exon254167   144   X: 11809549-11809692 Caenorhabditis elegans
Exon254174   172   X: 11809751-11809922 Caenorhabditis elegans
Exon254181   147   X: 11809986-11810132 Caenorhabditis elegans
Exon254188   124   X: 11810180-11810303 Caenorhabditis elegans
Exon254195   100   X: 11810537-11810636 Caenorhabditis elegans
Exon254202   285   X: 11810973-11811257 Caenorhabditis elegans
Exon254209   237   X: 11811304-11811540 Caenorhabditis elegans
Exon254216   97   X: 11813929-11814025 Caenorhabditis elegans
Exon254222   95   X: 11814559-11814653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.2e.1 11805978 11814653 -1

1 Sequence

Length
2418

1 Sequence Ontology Term

Identifier Name Description
transcript