WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.2f.1 Sequence Name  C34E11.2f.1
Length (nt)  2233   Chromosome Location  X: 11805978-11814750
Chromosome . Primary Identifier  X Chromosome Location . Start  11805978
Chromosome Location . End  11814750 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007935 C34E11.2 C34E11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.2f C34E11.2f 2136   X: 11805978-11806070

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E11.2f.1 11805978 11814750 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254126   93   X: 11805978-11806070 Caenorhabditis elegans
Exon254134   330   X: 11806173-11806502 Caenorhabditis elegans
Exon254142   114   X: 11807330-11807443 Caenorhabditis elegans
Exon254145   43   X: 11807745-11807787 Caenorhabditis elegans
Exon254151   43   X: 11807874-11807916 Caenorhabditis elegans
Exon254161   112   X: 11809392-11809503 Caenorhabditis elegans
Exon254168   144   X: 11809549-11809692 Caenorhabditis elegans
Exon254175   172   X: 11809751-11809922 Caenorhabditis elegans
Exon254182   147   X: 11809986-11810132 Caenorhabditis elegans
Exon254189   124   X: 11810180-11810303 Caenorhabditis elegans
Exon254196   100   X: 11810537-11810636 Caenorhabditis elegans
Exon254203   285   X: 11810973-11811257 Caenorhabditis elegans
Exon254210   237   X: 11811304-11811540 Caenorhabditis elegans
Exon254217   97   X: 11813929-11814025 Caenorhabditis elegans
Exon254224   192   X: 11814559-11814750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E11.2f.1 11805978 11814750 -1

1 Sequence

Length
2233

1 Sequence Ontology Term

Identifier Name Description
transcript