WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3c.1 Sequence Name  C34E11.3c.1
Length (nt)  5213   Chromosome Location  X: 11824168-11836129
Chromosome . Primary Identifier  X Chromosome Location . Start  11824168
Chromosome Location . End  11836129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3c C34E11.3c 1371   X: 11833438-11833599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3c.1 11824168 11836129 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254235   91   X: 11824168-11824258 Caenorhabditis elegans
Exon254239   106   X: 11824311-11824416 Caenorhabditis elegans
Exon254248   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254255   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254262   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254269   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254276   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254283   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254290   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254297   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254304   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254311   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254318   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254325   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254332   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254339   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254346   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254353   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254362   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254370   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254378   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254385   129   X: 11834388-11834516 Caenorhabditis elegans
Exon254391   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254399   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254407   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254415   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254426   337   X: 11835793-11836129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3c.1 11824168 11836129 1

1 Sequence

Length
5213

1 Sequence Ontology Term

Identifier Name Description
transcript