WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3f.1 Sequence Name  C34E11.3f.1
Length (nt)  5122   Chromosome Location  X: 11824184-11836129
Chromosome . Primary Identifier  X Chromosome Location . Start  11824184
Chromosome Location . End  11836129 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3f C34E11.3f 4875   X: 11824184-11824258

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3f.1 11824184 11836129 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254238   75   X: 11824184-11824258 Caenorhabditis elegans
Exon254241   106   X: 11824311-11824416 Caenorhabditis elegans
Exon254251   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254258   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254265   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254272   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254279   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254286   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254293   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254300   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254307   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254314   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254321   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254328   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254335   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254342   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254349   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254356   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254366   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254374   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254382   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254388   54   X: 11834463-11834516 Caenorhabditis elegans
Exon254395   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254403   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254411   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254419   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254427   337   X: 11835793-11836129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3f.1 11824184 11836129 1

1 Sequence

Length
5122

1 Sequence Ontology Term

Identifier Name Description
transcript