WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3d.1 Sequence Name  C34E11.3d.1
Length (nt)  4980   Chromosome Location  X: 11824311-11836116
Chromosome . Primary Identifier  X Chromosome Location . Start  11824311
Chromosome Location . End  11836116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3d C34E11.3d 1242   X: 11833438-11833599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3d.1 11824311 11836116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254243   106   X: 11824311-11824416 Caenorhabditis elegans
Exon254249   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254256   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254263   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254270   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254277   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254284   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254291   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254298   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254305   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254312   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254319   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254326   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254333   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254340   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254347   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254354   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254364   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254372   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254380   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254393   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254401   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254409   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254417   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254425   324   X: 11835793-11836116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3d.1 11824311 11836116 1

1 Sequence

Length
4980

1 Sequence Ontology Term

Identifier Name Description
transcript