WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3b.1 Sequence Name  C34E11.3b.1
Length (nt)  4782   Chromosome Location  X: 11826093-11835882
Chromosome . Primary Identifier  X Chromosome Location . Start  11826093
Chromosome Location . End  11835882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3b C34E11.3b 4782   X: 11826093-11826234

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3b.1 11826093 11835882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254245   142   X: 11826093-11826234 Caenorhabditis elegans
Exon254247   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254254   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254261   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254268   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254275   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254282   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254289   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254296   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254303   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254310   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254317   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254324   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254331   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254338   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254345   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254352   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254361   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254369   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254377   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254390   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254398   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254406   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254414   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254421   90   X: 11835793-11835882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3b.1 11826093 11835882 1

1 Sequence

Length
4782

1 Sequence Ontology Term

Identifier Name Description
transcript