WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3c.2 Sequence Name  C34E11.3c.2
Length (nt)  1742   Chromosome Location  X: 11832768-11835882
Chromosome . Primary Identifier  X Chromosome Location . Start  11832768
Chromosome Location . End  11835882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3c C34E11.3c 1371   X: 11833438-11833599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E11.3c.2 11832768 11835882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254358   53   X: 11832768-11832820 Caenorhabditis elegans
Exon254359   117   X: 11832882-11832998 Caenorhabditis elegans
Exon254363   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254371   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254379   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254386   129   X: 11834388-11834516 Caenorhabditis elegans
Exon254392   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254400   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254408   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254416   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254422   90   X: 11835793-11835882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E11.3c.2 11832768 11835882 1

1 Sequence

Length
1742

1 Sequence Ontology Term

Identifier Name Description
transcript