WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F7.8.1 Sequence Name  F54F7.8.1
Length (nt)  841   Chromosome Location  X: 11853631-11855003
Chromosome . Primary Identifier  X Chromosome Location . Start  11853631
Chromosome Location . End  11855003 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010068 F54F7.8 F54F7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F7.8 F54F7.8 630   X: 11853835-11853922

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F7.8.1 11853631 11855003 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254452   292   X: 11853631-11853922 Caenorhabditis elegans
Exon254453   86   X: 11854409-11854494 Caenorhabditis elegans
Exon254454   463   X: 11854541-11855003 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F7.8.1 11853631 11855003 -1

1 Sequence

Length
841

1 Sequence Ontology Term

Identifier Name Description
transcript