WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F7.6.1 Sequence Name  F54F7.6.1
Length (nt)  1186   Chromosome Location  X: 11865383-11866827
Chromosome . Primary Identifier  X Chromosome Location . Start  11865383
Chromosome Location . End  11866827 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010066 F54F7.6 F54F7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F7.6 F54F7.6 1092   X: 11865386-11865703

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F7.6.1 11865383 11866827 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254469   321   X: 11865383-11865703 Caenorhabditis elegans
Exon254470   480   X: 11865751-11866230 Caenorhabditis elegans
Exon254471   158   X: 11866398-11866555 Caenorhabditis elegans
Exon254472   227   X: 11866601-11866827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F7.6.1 11865383 11866827 1

1 Sequence

Length
1186

1 Sequence Ontology Term

Identifier Name Description
transcript